Lin, Y.-C., Intoy, J., Clark, A.M., Rucci, M., and Victor, J.D. (2023)
Cognitive influences on fixational eye movements.
Current Biology 8, 1606-1612.
Summary, download, and supplement
Zhao, Z., Ahissar, E., Victor, J.D., and Rucci, M.R. (2023)
Inferring visual space from ultra-fine knowledge of gaze position in spatial vision.
Nature Communications 14, 269.
Abstract and download
Guidolin, A., Desroches, M., Victor, J.D., Purpura, K.P., and Rodrigues, R. (2022)
Geometry of spiking patterns in early visual cortex: a topological data analytic approach.
Journal of the Royal Society Interface 19: 20220677.
Abstract and download
Sammons, J.D., Bass, C.E., Victor, J.D., and Di Lorenzo, P.M. (2020)
Enhancing GABAergic tone in the rostral nucleus of the solitary tract reconfigures sensorimotor neural activity.
J. Neurosci., doi: https://doi.org/10.1523/JNEUROSCI.0388-20.2020.
Abstract and download
Mostofi, N., Zhao, Z., Intoy, J., Boi, M., Victor, J.D., and Rucci, M. (2020)
Spatiotemporal content of saccade transients.
Current Biology 30, p3999-4008.e2.
Abstract and download
Kreuz, T., Houghton, C., and Victor, J.D. (2020)
Spike train distance.
In: Jaeger D., Jung R. (eds) Encyclopedia of Computational Neuroscience. Springer, New York, NY.
doi://doi.org/10.1007/978-1-4614-7320-6_409-2.
Overview and download
Victor, J.D., Boie, S.D., Connor, E.G., Crimaldi, J., Ermentrout, B., and Nagel, K.I. (2019)
Olfactory navigation and the receptor nonlinearity. J. Neurosci., 39, 3713-3727.
Abstract and download
Ohla, K., Yoshida, R., Roper, S.D., DiLorenzo, P.M., Victor, J.D.,
Boughter Jr., J.D., Fletcher, M., Katz, D.B., and Chaudhari, N. (2019)
Recognizing taste: coding patterns along the neural axis in mammals.
Chemical Senses 15, 237-247.
Abstract and download
Casile, A., Victor, J.D., and Rucci, M. (2019) Contrast sensitivity reveals an oculomotor strategy for temporally encoding space. eLife 2019;8:e40924. doi: https://doi.org/10.7554/eLife.40924.
Abstract and download
Denman, A., Sammons, J.D., Victor, J.D., and DiLorenzo, P.M. (2019)
Heterogeneity of neuronal responses in the nucleus of the solitary tract suggests sensorimotor integration in the neural code for taste.
J. Neurophysiol. 121, 634-645.
Abstract and download
Rucci, M., and Victor, J.D. (2018)
Perspective: Can eye movements contribute to emmetropization?
Journal of Vision 18, 1–6.
Abstract and download
Boie, S.D., Connor, E.G., McHugh, M.K., Nagel, K.I., Ermentrout, G.B., Crimaldi,J.P., and Victor, J.D. (2018)
Information-theoretic analysis of realistic odor plumes: What cues are useful for determining location?
PLoS Computational Biology, in press.
Abstract and download
Boi, M., Poletti, M., Victor, J.D., and Rucci, M. (2017)
Consequences of the oculomotor cycle for the dynamics of perception.
Current Biology 27, 1268-77.
Abstract, commentary, download, and supplement
Sammons, J.D., Weiss, M.S., Victor, J.D., and Di Lorenzo, P.M. (2016)
Taste coding of complex naturalistic taste stimuli and traditional taste stimuli in the parabrachial pons of the awake, freely licking rat.
J. Neurophysiol. 116, 171-182.
Abstract and download
Sammons, J.D., Weiss, M.S., Escanilla, O.D., Fooden, A.F., Victor, J.D., and Di Lorenzo, P.M. (2016)
Spontaneous changes in taste sensitivity of single units recorded over consecutive days in the brainstem of the awake rat.
PLoS ONE 2016;11, e0160143. doi: 10.1371/journal.pone.0160143.
Abstract and download
Escanilla, O.D., Victor, J.D., and DiLorenzo, P.M. (2015)
Odor-taste convergence in the nucleus of the solitary tract of the awake freely-licking rat.
Olga D. Escanilla, Jonathan D. Victor, and Patricia M. Di Lorenzo
Journal of Neuroscience 35, 6284-6297.
Abstract and download
Rucci, M., and Victor, J.D. (2015)
The unsteady eye: an information processing stage, not a bug.
Trends in Neurosciences 38, 195-206.
Abstract and download
Aytekin, M., Victor, J.D., and Rucci, M. (2014)
The visual input to the retina during natural head-free fixation.
The Journal of Neuroscience 34, 12701–12715.
Abstract and download
Victor, J.D. (2015)
Spike train distance.
In: Encyclopedia of Computational Neuroscience. Ed: D. Jaeger & R. Jung, pp 2808-2814.
Springer New York, Heidelberg ,Dordrecht, London, online.
Summary and download
Weiss, M., Victor, J.D., and DiLorenzo, P. (2014)
Taste coding in the parabrachial nucleus of the pons in awake, freely licking rats,
and comparison with the nucleus of the solitary tract.
J. Neurophysiol. 111, 1655-1670.
Abstract and download
Victor, J.D., and Nirenberg, S. (2013)
Spike trains as event sequences: Fundamental implications.
In, Spike Timing: Mechanisms and Function. Eds: Patricia DiLorenzo and Jonathan Victor.
Taylor & Francis, CRC Press, 3-33.
Introduction and download
Roussin, A.T., D'Agostino, A.E., Fooden, A.M., Victor, J.D., and DiLorenzo, P.M. (2012)
Taste coding in the nucleus of the solitary tract of the awake, freely licking rat.
J. Neurosci. 32, 10494-10506.
Abstract and download
Kuang, X., Poletti, M., Victor, J.D., and Rucci, M. (2012)
Temporal encoding of spatial information during active visual fixation.
Current Biology 22, 510–514.
Summary, download, commentary, and supplement
Dimitrov, A.G., Lazar, A.A., and Victor, J.D. (2011)
Information theory in neuroscience.
J Comput. Neurosci. 30, 1-5.
Introduction and download
Rosen, A.M., Victor, J.D, and DiLorenzo, P.D. (2011)
Temporal coding of taste in the parabrachial nucleus of the pons of the rat.
J. Neurophysiol. 105, 1889-1896.
Abstract and download
Chen, J.-Y., Victor, J.D., and Di Lorenzo, P. (2011)
Temporal coding of intensity of NaCl and HCl in the nucleus of the solitary tract of the rat.
J. Neurophysiol. 105, 697-711.
Abstract and download
Ohiorhenuan, I.E., and Victor, J.D. (2011)
Information-geometric measure of 3-neuron firing patterns characterizes scale-dependence in cortical networks.
J. Comput. Neurosci. 30, 125-141.
Abstract and download
Houghton, C., and Victor, J.D. (2011) Measuring representational distances – the spike metric approach.
In Understanding Visual Population Codes – Towards a Common Multivariate Framework for Cell Recording and Functional Imaging.
Eds: Nikolaus Kriegeskorte and Gabriel Kreiman. MIT Press, in press.
Abstract and download
Ohiorhenuan, I.E., Mechler, F., Purpura, K.P., Schmid, A.M., and Victor, J.D. (2010)
Sparse coding and high-order correlations in fine-scale cortical networks.
Nature 466 617–621.
Abstract and download
Victor, J.D., and Purpura, K.P. (2010) Spike Metrics.
In: Analysis of Parallel Spike Trains. Ed. Stefan Rotter and Sonja Gruen. Springer, pp. 129-156.
Abstract and download
Nirenberg, S., Bomash, I., Pillow, J.W., and Victor, J.D. (2010)
Heterogeneous response dynamics in retinal ganglion cells: the interplay of predictive coding and adaptation. J. Neurophysiol. 103, 3184-3194.
Abstract, download, and supplement
Pandarinath, C., Victor, J.D., and Nirenberg, S. (2010)
Symmetry breakdown in the ON and OFF pathways of the retina at night: functional implications.
J. Neurosci. 30,10006-10014.
Abstract and download
Goldberg, D.H., Victor, J.D., Gardner, E.P., and Gardner, D., (2009) Spike Train Analysis Toolkit:
Enabling wider application of information-theoretic techniques to neurophysiology. Neuroinformatics 7, 165-178.
Abstract, download, and links to code
Di Lorenzo, P., Chen, J.-Y., and Victor, J.D. (2009)
Quality time: Representation of a multidimensional sensory domain through temporal coding. J. Neurosci. 29, 9227-9238.
Abstract, erratum, and download
Di Lorenzo, P.M., Platt, D. and Victor, J.D. (2009) Information processing in the parabrachial nucleus of the pons: Temporal relationships of input and output.
Ann. N.Y. Acad. Sci. 1170, 365–371.
Abstract and download
Victor, J.D., and Nirenberg S. (2008)
Indices for testing neural codes.
Neural Comput. 20, 2895-2936.
Abstract and download
Roussin, A.T., Victor, J.D., Chen, J.-Y.and Di Lorenzo, P.M. (2008) Variability in responses and temporal coding of tastants of similar quality in the nucleus of the solitary tract of the rat. J. Neurophysiol., 99 (2): 644-655.
Abstract, download, and editorial
Nirenberg, S., and Victor, J.D. (2007) Analyzing the activity of large populations of neurons - how tractable is the problem?
Current Opinion in Neurobiology 17, 397-400.
Abstract and download
Mechler, F., Ohiorhenuan, I.E., and Victor, J.D. (2007)
Speed dependence of tuning to one-dimensional features in V1.
J. Neurophysiol., 97, 2423-2438.
Abstract and download
Di Lorenzo, P.M., and Victor, J.D. (2007)
Neural coding mechanisms for flow rate in taste-responsive cells
in the nucleus of the solitary tract of the rat.
J. Neurophysiol. 97, 1857-1861.
Abstract and download
Victor, J.D., Goldberg, D., and Gardner, D. (2007)
Dynamic programming algorithms for comparing multineuronal
spike trains via cost-based metrics and alignments.
J. Neurosci. Meth. 161, 351-360.
Abstract, download, and code
Victor, J.D. (2006) Approaches to information-theoretic analysis of neural activity. Biological Theory 1, 302-316.
Abstract and download
Victor, J.D., Mechler, F., Repucci, M.A., Purpura, K.P., and Sharpee, T. (2006)
Responses of V1 neurons to two-dimensional Hermite functions.
J. Neurophysiol. 95, 379-400.
Abstract, related presentations, code, and download
Victor, J.D. (2005) Spike train metrics.
Current Opinion in Neurobiology 15, 585–592.
Abstract and download
Aronov, D., and Victor, J. (2004)
Non-Euclidean properties of spike train metric spaces.
Phys. Rev. E69, 61905.
Abstract, download, and related notes
Di Lorenzo, P.M, and Victor, J.D. (2003)
Taste response variability and temporal coding in the nucleus of the solitary tract of the rat.
J. Neurophysiol. 90, 1418-1433.
Abstract, download, and editorial
Aronov, D. (2003)
Fast algorithm for the metric-space analysis of simultaneous responses of multiple single neurons.
J. Neuroscience Methods 124, 175-179.
Abstract, download, and code
Victor, J.D., and Brown, E. (2003)
Information and statistical structure in spike trains.
Network 14, 1-4.
Abstract and download
Aronov, D., Reich, D.S., Mechler, F., and Victor, J.D. (2003)
Neural coding of spatial phase in V1 of the macaque monkey.
J. Neurophysiol. 89, 3304-3327.
Abstract and download
Mechler, F., Reich, D.S., and Victor, J.D. (2002)
Detection and discrimination of relative spatial phase by V1 neurons.
J. Neurosci. 22, 6129-6157.
Abstract and download
Victor, J.D. (2002)
Binless strategies for estimation of information from neural data.
Phys. Rev. E. 66, 51903.
Abstract, related presentations, erratum, and download
Reich, D.S., Mechler, F., and Victor, J.D. (2001)
Independent and redundant information in nearby cortical neurons.
Science 294, 2566-2568.
Abstract, download, and commentary
Reich, D.S., Mechler, F., and Victor, J.D. (2001)
Temporal coding of contrast in primary visual cortex: when, what, and why?
J. Neurophysiol. 85, 1039-1050.
Abstract and downloads
Reich, D.S., Mechler, F., and Victor, J.D. (2001)
Formal and attribute-specific information in primary visual cortex.
J. Neurophysiol. 85, 305-318.
Abstract and downloads
Victor, J.D. (2000)
How the brain uses time to represent and process visual information.
In Towards 2010 - A Brain Odyssey. ed: F. Bloom.
Brain Res. 886, 33-46.
Abstract and download
Victor, J.D. (2000)
Asymptotic bias in information estimates and
the exponential (Bell) polynomials.
Neural Computation 12, 2797-2804.
Abstract and download
Victor, J.D. (1999)
Temporal aspects of neural coding in the retina and lateral geniculate: a review.
Network 10, R1-66.
Abstract and download
Victor, J.D., and Purpura, K.P. (1999)
Estimation of information in neuronal responses.
Trends in Neurosciences 22, 543.
Text and references
Mechler, F., Victor, J.D., Purpura, K.P., and Shapley, R. (1998)
Robust temporal coding of contrast by
V1 neurons for transient but not steady-state stimuli.
J. Neurosci. 18, 6583-6598.
Abstract and downloads
Victor, J.D., and Purpura, K.P. (1998)
Spatial phase and the temporal structure of the response to gratings in V1.
J. Neurophysiol. 80, 554-571.
Abstract and downloads
Victor, J.D., and Purpura, K.P. (1997)
Sensory coding in cortical neurons:
recent results and speculations.
In: Frontiers of Neurology: A Symposium in Honor of Fred Plum.
Annals of the New York Academy of Sciences 835, 330-352.
Abstract and key figures
Victor, J.D., and Purpura, K. (1997)
Metric-space analysis of spike trains:
theory, algorithms, and application.
Network 8, 127-164.
Abstract, code, and downloads
Victor, J.D., and Purpura, K. (1996)
Nature and precision of temporal coding in visual cortex: a
metric-space analysis. J. Neurophysiol. 76, 1310-1326.
Summary, key figure, code, and downloads
Victor, J.D., Purpura, K., Katz, E., and Mao, B.
(1994) Population encoding of spatial frequency,
orientation, and color in macaque V1. J.
Neurophysiol. 72, 2151-2166.
Summary, key figure, and downloads
Guidolin, A., Desroches, M., Victor, J.D., Purpura, K.P., and Rodrigues, R. (2022)
Geometry of spiking patterns in early visual cortex: a topological data analytic approach.
Journal of the Royal Society Interface 19: 20220677.
Abstract and download
Ohiorhenuan, I.E., Mechler, F., Purpura, K.P., Schmid, A.M., Hu, Q., and Victor, J.D. (2014)
Cannabinoid neuromodulation in the adult early visual cortex.
PLoS ONE 9, e87362.
Abstract, download, and supplement
Hudson, A.E., Schiff, N.D., Victor, J.D, and Purpura, K.P. (2009)
Attentional modulation of adaptation in V4.
Eur. J. Neurosci. 30,151-171.
Abstract and download
Bondar , I.V., Leopold, D.A., Richmond, B.J., Victor, J.D., and Logothetis, N.K. (2009)
Long-term stability of visual pattern selective responses of monkey temporal lobe neurons.
PLOS ONE, 4(12):e8222
Abstract and download
Victor, J.D., Blessing, E., Forte, J.D., Buzás, P., and Martin, P. R. (2007)
Response variability of marmoset parvocellular neurons. J. Physiol. (Lond) 579, 29-51.
Abstract and download
Casti, A., Omurtag, A., Sornborger, A., Kaplan, E.,
Sirovich, L., Knight, B., and Victor, J.D. (2002)
A population study of integrate-and-fire-or-burst neurons.
Neural Computation 14, 957-986.
Abstract and download
Reich, D.S., Mechler, F., Purpura, K.P., and Victor, J.D. (2000)
Interspike intervals, receptive fields, and
information encoding in primary visual cortex. J. Neurosci. 20, 1964-1974.
Abstract and downloads
Schiff, N.D., Purpura, K.P., and Victor, J.D. (1999)
Gating of local network signals appears as stimulus-dependent activity
envelopes in striate cortex.
J. Neurophysiol. 82, 2182-2196.
Abstract, key figure, and downloads
Reich, D.S., Victor, J.D., and Knight, B.W. (1998)
The power ratio and the interval map:
spiking models and extracellular data.
J. Neurosci. 18, 10090-10104.
Abstract, key figure, and downloads
Reich, D.S., Victor, J.D., Knight, B.W., Ozaki, T., and Kaplan,
E. (1997)
Response variability and timing precision of neuronal spike
trains in vivo.
J. Neurophysiol. 77, 2836-2841.
Summary, key figure, and downloads