This is a list of web sites that include material relevant to the logic and esperimental design site, including links to journals; publishers; organism specific data bases; reference; companies
Go to: dictionary | proteins | cDNAs | antibodies | DNA &
bioinformatics | back to
National Library of Medicine which has a link to 'Greatful Med', a fine on-line search engine
American Type Culture Collection. at http://www.atcc.org
Galaxo pharmacology guide and definitions
Yahoo search engine. at http://www.yahoo.com/Science/Biology/Cell_Biology/
Current Protocols by John Wiley & Sons. at http://journals.wiley.com/cp
Cell Bio dictionary. at http://www.mblab.gla.ac.uk/~julian/Dict.html
Virtual Cell Bio sources. at http://lenti.med.umn.edu/~mwd/courses.html
Gene therapy resource. at http://www.mc.vanderbilt.edu/gcrc/gene/viral.htm
Pedro's BioMolecular Research Tools at http://www.public.iastate.edu/~pedro/research_tools.html
The National Center for Biotechnology Information at http://www.ncbi.nlm.nih.gov
The Dana BrainWeb and the Dana Alliance at http://www.dana.org/brainweb or http://www.dana.org
IonSource has a site with Mass Spectrometry and Biotechnology Resource, including tutorials.
FlyBase. Database containing genetic and molecular data for Drosophila.
other addresses include: France (http://astorg.u-strasbg.fr:7081); Australia (http://www.angis.su.oz.au:7081); & Japan (http://shigen.lab.nig.ac.jp:7081)
FlyBase is also availiable as the Encyclopedia of Drosophila at http://fruitfly.berkeley.edu
This is a collaborative effort between Berkeley Drosophila Genome Project and FlyBase
and Stanford maintains a yeast genome database called SGD.
Access to annotated sequence of complete genome for Saccharomyces cerevisiae. Options include searches, chromosome displays, alignments, functional analyses.
MITOMAP: A human mitochondrial genome database
Cold Spring Harbor Laboratory and the CSHL Press. at http://www.cshl.org
Companies with products and proceedures--look up a company
Look at Biowire, Lab Velosity's site devoted to reviews of products and proceedures.
perkin elmer: reagents
invitrogen: expression systems
clontech: research tools/kits
Gibco life tech: cell culture media
Promega molecular biology-get you subscription to promega notes
stratagene molecular biology, libraries & vectors
Protein structure sites:
protein data base is a primary store of experimentally determined atomic coordinates of proteins. Each coordinate has a unique identification code that can be retrieved together with the coordinates and other info about the structure, including interacive images, by searching for the protein's name or publication details).
protein science kinemages is interactive molecular images produced by program Mage. Many on-line journals use the kinemage format to display protein structures.
rasmol and chime are interactive molecular images from molecule's atomic coordinates
protein structure classification arranges domains according to class, architecture and topology plus there is a useful glossary (from University College London).
Protein topology homepage provides a program that searches for specific topologies and can determine the topology of a new, unique protein
The Dali server points out interesting biological similarities between two proteins
Expert Protein Analysis System includes protein sequence and structure information.
pfam is a set of database of multiple sequence alingment of homologous domains from the Sanger center.